dentist ~master (2019-01-03T11:08:59Z)
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ContigNode
dentist
common
scaffold
A contig is represented by four
ContigNodes
in the scaffold graph.
alias
ContigNode
=
Tuple
!(
size_t
, "contigId",
ContigPart
, "contigPart")
See Also
ContigPart
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dentist
common
scaffold
aliases
ContigNode
Scaffold
enums
ContigPart
JoinPolicy
functions
buildScaffold
discardAmbiguousJoins
enforceJoinPolicy
getDefaultJoin
getUnkownJoin
initScaffold
isAntiParallel
isBackExtension
isDefault
isExtension
isFrontExtension
isGap
isParallel
isUnkown
isValid
linearWalk
mergeExtensionsWithGaps
normalizeUnkownJoins
removeExtensions
removeNoneJoins
scaffoldStarts
structs
LinearWalk
A contig is represented by four ContigNodes in the scaffold graph.