This package holds common code for the dentist algorithm.
Everything to handle local alignments and friends.
This package contains methods to handle the proprietary binary data containers.
Everything to handle insertions.
Work with scaffold graphs.
An interval of a read contig.
A point on a read.
A region of a read aka. mask.
An interval of a reference contig.
A point on the reference.
A region of the reference aka. mask.
Thrown if some runtime error in the dentist algorithm occurs.
Returns the alignment region of alignmentChain.
True iff building with testing commands.
A point on the output assembly.
Evaluate to value if building with testing command; otherwise to typeof(value).init.